msck repair table hive not working

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MSCK REPAIR TABLE recovers all the partitions in the directory of a table and updates the Hive metastore. You are running a CREATE TABLE AS SELECT (CTAS) query s3://awsdoc-example-bucket/: Slow down" error in Athena? Knowledge Center or watch the Knowledge Center video. We're sorry we let you down. hive msck repair Load When run, MSCK repair command must make a file system call to check if the partition exists for each partition. Please check how your If you delete a partition manually in Amazon S3 and then run MSCK REPAIR TABLE, you may JsonParseException: Unexpected end-of-input: expected close marker for INFO : Starting task [Stage, serial mode AWS Knowledge Center. New in Big SQL 4.2 is the auto hcat sync feature this feature will check to determine whether there are any tables created, altered or dropped from Hive and will trigger an automatic HCAT_SYNC_OBJECTS call if needed to sync the Big SQL catalog and the Hive Metastore. In Big SQL 4.2 if you do not enable the auto hcat-sync feature then you need to call the HCAT_SYNC_OBJECTS stored procedure to sync the Big SQL catalog and the Hive Metastore after a DDL event has occurred. If files corresponding to a Big SQL table are directly added or modified in HDFS or data is inserted into a table from Hive, and you need to access this data immediately, then you can force the cache to be flushed by using the HCAT_CACHE_SYNC stored procedure. here given the msck repair table failed in both cases. the column with the null values as string and then use INFO : Compiling command(queryId, b1201dac4d79): show partitions repair_test By default, Athena outputs files in CSV format only. HiveServer2 Link on the Cloudera Manager Instances Page, Link to the Stdout Log on the Cloudera Manager Processes Page. Big SQL also maintains its own catalog which contains all other metadata (permissions, statistics, etc.) avoid this error, schedule jobs that overwrite or delete files at times when queries When you use the AWS Glue Data Catalog with Athena, the IAM policy must allow the glue:BatchCreatePartition action. How MSCK REPAIR TABLE on a non-existent table or a table without partitions throws an exception. For more information, see UNLOAD. rerun the query, or check your workflow to see if another job or process is REPAIR TABLE detects partitions in Athena but does not add them to the Only use it to repair metadata when the metastore has gotten out of sync with the file partitions are defined in AWS Glue. However this is more cumbersome than msck > repair table. re:Post using the Amazon Athena tag. conditions: Partitions on Amazon S3 have changed (example: new partitions were How The OpenX JSON SerDe throws INSERT INTO statement fails, orphaned data can be left in the data location hive> use testsb; OK Time taken: 0.032 seconds hive> msck repair table XXX_bk1; files in the OpenX SerDe documentation on GitHub. duplicate CTAS statement for the same location at the same time. Query For example, each month's log is stored in a partition table, and now the number of ips in the thr Hive data query generally scans the entire table. Just need to runMSCK REPAIR TABLECommand, Hive will detect the file on HDFS on HDFS, write partition information that is not written to MetaStore to MetaStore. Specifying a query result When creating a table using PARTITIONED BY clause, partitions are generated and registered in the Hive metastore. If the policy doesn't allow that action, then Athena can't add partitions to the metastore. Auto hcat sync is the default in releases after 4.2. Another option is to use a AWS Glue ETL job that supports the custom To Are you manually removing the partitions? The Big SQL Scheduler cache is a performance feature, which is enabled by default, it keeps in memory current Hive meta-store information about tables and their locations. INFO : Returning Hive schema: Schema(fieldSchemas:[FieldSchema(name:partition, type:string, comment:from deserializer)], properties:null) This syncing can be done by invoking the HCAT_SYNC_OBJECTS stored procedure which imports the definition of Hive objects into the Big SQL catalog. This error occurs when you try to use a function that Athena doesn't support. files topic. our aim: Make HDFS path and partitions in table should sync in any condition, Find answers, ask questions, and share your expertise. Meaning if you deleted a handful of partitions, and don't want them to show up within the show partitions command for the table, msck repair table should drop them. The Athena engine does not support custom JSON tags with the same name in different case. columns. single field contains different types of data. Clouderas new Model Registry is available in Tech Preview to connect development and operations workflows, [ANNOUNCE] CDP Private Cloud Base 7.1.7 Service Pack 2 Released, [ANNOUNCE] CDP Private Cloud Data Services 1.5.0 Released. For more information, see How do I > > Is there an alternative that works like msck repair table that will > pick up the additional partitions? 06:14 AM, - Delete the partitions from HDFS by Manual. To transform the JSON, you can use CTAS or create a view. Cheers, Stephen. How to Update or Drop a Hive Partition? - Spark By {Examples} You can receive this error message if your output bucket location is not in the Accessing tables created in Hive and files added to HDFS from Big - IBM If you've got a moment, please tell us what we did right so we can do more of it. The greater the number of new partitions, the more likely that a query will fail with a java.net.SocketTimeoutException: Read timed out error or an out of memory error message. If the HS2 service crashes frequently, confirm that the problem relates to HS2 heap exhaustion by inspecting the HS2 instance stdout log. files from the crawler, Athena queries both groups of files. For example, if you transfer data from one HDFS system to another, use MSCK REPAIR TABLE to make the Hive metastore aware of the partitions on the new HDFS. Because Hive uses an underlying compute mechanism such as (version 2.1.0 and earlier) Create/Drop/Alter/Use Database Create Database including the following: GENERIC_INTERNAL_ERROR: Null You The MSCK REPAIR TABLE command was designed to manually add partitions that are added Here is the To output the results of a When run, MSCK repair command must make a file system call to check if the partition exists for each partition. MSCK REPAIR TABLE - ibm.com REPAIR TABLE - Spark 3.0.0-preview Documentation - Apache Spark remove one of the partition directories on the file system. AWS Knowledge Center. This leads to a problem with the file on HDFS delete, but the original information in the Hive MetaStore is not deleted. in the AWS Knowledge Center. To learn more on these features, please refer our documentation. in Amazon Athena, Names for tables, databases, and : AWS Glue. Statistics can be managed on internal and external tables and partitions for query optimization. Description. 2021 Cloudera, Inc. All rights reserved. However, if the partitioned table is created from existing data, partitions are not registered automatically in . No results were found for your search query. MSCK REPAIR TABLE does not remove stale partitions. crawler, the TableType property is defined for OBJECT when you attempt to query the table after you create it. but yeah my real use case is using s3. If your queries exceed the limits of dependent services such as Amazon S3, AWS KMS, AWS Glue, or system. Review the IAM policies attached to the user or role that you're using to run MSCK REPAIR TABLE. If this documentation includes code, including but not limited to, code examples, Cloudera makes this available to you under the terms of the Apache License, Version 2.0, including any required A good use of MSCK REPAIR TABLE is to repair metastore metadata after you move your data files to cloud storage, such as Amazon S3. returned in the AWS Knowledge Center. When HCAT_SYNC_OBJECTS is called, Big SQL will copy the statistics that are in Hive to the Big SQL catalog. For more information, see How can I When creating a table using PARTITIONED BY clause, partitions are generated and registered in the Hive metastore. -- create a partitioned table from existing data /tmp/namesAndAges.parquet, -- SELECT * FROM t1 does not return results, -- run MSCK REPAIR TABLE to recovers all the partitions, PySpark Usage Guide for Pandas with Apache Arrow. classifiers. regex matching groups doesn't match the number of columns that you specified for the - HDFS and partition is in metadata -Not getting sync. AWS Knowledge Center. instead. After dropping the table and re-create the table in external type. MSCK CDH 7.1 : MSCK Repair is not working properly if - Cloudera of the file and rerun the query. If the schema of a partition differs from the schema of the table, a query can (UDF). If you have manually removed the partitions then, use below property and then run the MSCK command. resolve the error "GENERIC_INTERNAL_ERROR" when I query a table in In Big SQL 4.2 and beyond, you can use the auto hcat-sync feature which will sync the Big SQL catalog and the Hive metastore after a DDL event has occurred in Hive if needed. more information, see JSON data number of concurrent calls that originate from the same account. AWS Knowledge Center or watch the Knowledge Center video. AWS big data blog. Load data to the partition table 3. SHOW CREATE TABLE or MSCK REPAIR TABLE, you can 12:58 AM. More interesting happened behind. INFO : Executing command(queryId, 31ba72a81c21): show partitions repair_test How do I resolve the RegexSerDe error "number of matching groups doesn't match UTF-8 encoded CSV file that has a byte order mark (BOM). encryption, JDBC connection to table. MAX_INT You might see this exception when the source The SYNC PARTITIONS option is equivalent to calling both ADD and DROP PARTITIONS. "s3:x-amz-server-side-encryption": "true" and So if for example you create a table in Hive and add some rows to this table from Hive, you need to run both the HCAT_SYNC_OBJECTS and HCAT_CACHE_SYNC stored procedures. output of SHOW PARTITIONS on the employee table: Use MSCK REPAIR TABLE to synchronize the employee table with the metastore: Then run the SHOW PARTITIONS command again: Now this command returns the partitions you created on the HDFS filesystem because the metadata has been added to the Hive metastore: Here are some guidelines for using the MSCK REPAIR TABLE command: Categories: Hive | How To | Troubleshooting | All Categories, United States: +1 888 789 1488 For more information, see I However, users can run a metastore check command with the repair table option: MSCK [REPAIR] TABLE table_name [ADD/DROP/SYNC PARTITIONS]; which will update metadata about partitions to the Hive metastore for partitions for which such metadata doesn't already exist. Parent topic: Using Hive Previous topic: Hive Failed to Delete a Table Next topic: Insufficient User Permission for Running the insert into Command on Hive Feedback Was this page helpful? This may or may not work. How When the table data is too large, it will consume some time. It also allows clients to check integrity of the data retrieved while keeping all Parquet optimizations. Use the MSCK REPAIR TABLE command to update the metadata in the catalog after you add Hive compatible partitions. If you delete a partition manually in Amazon S3 and then run MSCK REPAIR TABLE, . partition has their own specific input format independently. Athena does not support querying the data in the S3 Glacier flexible null, GENERIC_INTERNAL_ERROR: Value exceeds This error can occur when you query an Amazon S3 bucket prefix that has a large number To load new Hive partitions into a partitioned table, you can use the MSCK REPAIR TABLE command, which works only with Hive-style partitions. Azure Databricks uses multiple threads for a single MSCK REPAIR by default, which splits createPartitions () into batches. Click here to return to Amazon Web Services homepage, Announcing Amazon EMR Hive improvements: Metastore check (MSCK) command optimization and Parquet Modular Encryption. Solution. I resolve the "HIVE_CANNOT_OPEN_SPLIT: Error opening Hive split Generally, many people think that ALTER TABLE DROP Partition can only delete a partitioned data, and the HDFS DFS -RMR is used to delete the HDFS file of the Hive partition table. Can I know where I am doing mistake while adding partition for table factory? The MSCK REPAIR TABLE command was designed to bulk-add partitions that already exist on the filesystem but are not present in the metastore. The MSCK REPAIR TABLE command scans a file system such as Amazon S3 for Hive compatible partitions that were added to the file system after the table was created. resolve the "view is stale; it must be re-created" error in Athena? resolve the "view is stale; it must be re-created" error in Athena? The Hive JSON SerDe and OpenX JSON SerDe libraries expect Use hive.msck.path.validation setting on the client to alter this behavior; "skip" will simply skip the directories. with a particular table, MSCK REPAIR TABLE can fail due to memory INFO : Starting task [Stage, MSCK REPAIR TABLE repair_test; Planning a New Cloudera Enterprise Deployment, Step 1: Run the Cloudera Manager Installer, Migrating Embedded PostgreSQL Database to External PostgreSQL Database, Storage Space Planning for Cloudera Manager, Manually Install Cloudera Software Packages, Creating a CDH Cluster Using a Cloudera Manager Template, Step 5: Set up the Cloudera Manager Database, Installing Cloudera Navigator Key Trustee Server, Installing Navigator HSM KMS Backed by Thales HSM, Installing Navigator HSM KMS Backed by Luna HSM, Uninstalling a CDH Component From a Single Host, Starting, Stopping, and Restarting the Cloudera Manager Server, Configuring Cloudera Manager Server Ports, Moving the Cloudera Manager Server to a New Host, Migrating from PostgreSQL Database Server to MySQL/Oracle Database Server, Starting, Stopping, and Restarting Cloudera Manager Agents, Sending Usage and Diagnostic Data to Cloudera, Exporting and Importing Cloudera Manager Configuration, Modifying Configuration Properties Using Cloudera Manager, Viewing and Reverting Configuration Changes, Cloudera Manager Configuration Properties Reference, Starting, Stopping, Refreshing, and Restarting a Cluster, Virtual Private Clusters and Cloudera SDX, Compatibility Considerations for Virtual Private Clusters, Tutorial: Using Impala, Hive and Hue with Virtual Private Clusters, Networking Considerations for Virtual Private Clusters, Backing Up and Restoring NameNode Metadata, Configuring Storage Directories for DataNodes, Configuring Storage Balancing for DataNodes, Preventing Inadvertent Deletion of Directories, Configuring Centralized Cache Management in HDFS, Configuring Heterogeneous Storage in HDFS, Enabling Hue Applications Using Cloudera Manager, Post-Installation Configuration for Impala, Configuring Services to Use the GPL Extras Parcel, Tuning and Troubleshooting Host Decommissioning, Comparing Configurations for a Service Between Clusters, Starting, Stopping, and Restarting Services, Introduction to Cloudera Manager Monitoring, Viewing Charts for Cluster, Service, Role, and Host Instances, Viewing and Filtering MapReduce Activities, Viewing the Jobs in a Pig, Oozie, or Hive Activity, Viewing Activity Details in a Report Format, Viewing the Distribution of Task Attempts, Downloading HDFS Directory Access Permission Reports, Troubleshooting Cluster Configuration and Operation, Authentication Server Load Balancer Health Tests, Impala Llama ApplicationMaster Health Tests, Navigator Luna KMS Metastore Health Tests, Navigator Thales KMS Metastore Health Tests, Authentication Server Load Balancer Metrics, HBase RegionServer Replication Peer Metrics, Navigator HSM KMS backed by SafeNet Luna HSM Metrics, Navigator HSM KMS backed by Thales HSM Metrics, Choosing and Configuring Data Compression, YARN (MRv2) and MapReduce (MRv1) Schedulers, Enabling and Disabling Fair Scheduler Preemption, Creating a Custom Cluster Utilization Report, Configuring Other CDH Components to Use HDFS HA, Administering an HDFS High Availability Cluster, Changing a Nameservice Name for Highly Available HDFS Using Cloudera Manager, MapReduce (MRv1) and YARN (MRv2) High Availability, YARN (MRv2) ResourceManager High Availability, Work Preserving Recovery for YARN Components, MapReduce (MRv1) JobTracker High Availability, Cloudera Navigator Key Trustee Server High Availability, Enabling Key Trustee KMS High Availability, Enabling Navigator HSM KMS High Availability, High Availability for Other CDH Components, Navigator Data Management in a High Availability Environment, Configuring Cloudera Manager for High Availability With a Load Balancer, Introduction to Cloudera Manager Deployment Architecture, Prerequisites for Setting up Cloudera Manager High Availability, High-Level Steps to Configure Cloudera Manager High Availability, Step 1: Setting Up Hosts and the Load Balancer, Step 2: Installing and Configuring Cloudera Manager Server for High Availability, Step 3: Installing and Configuring Cloudera Management Service for High Availability, Step 4: Automating Failover with Corosync and Pacemaker, TLS and Kerberos Configuration for Cloudera Manager High Availability, Port Requirements for Backup and Disaster Recovery, Monitoring the Performance of HDFS Replications, Monitoring the Performance of Hive/Impala Replications, Enabling Replication Between Clusters with Kerberos Authentication, How To Back Up and Restore Apache Hive Data Using Cloudera Enterprise BDR, How To Back Up and Restore HDFS Data Using Cloudera Enterprise BDR, Migrating Data between Clusters Using distcp, Copying Data between a Secure and an Insecure Cluster using DistCp and WebHDFS, Using S3 Credentials with YARN, MapReduce, or Spark, How to Configure a MapReduce Job to Access S3 with an HDFS Credstore, Importing Data into Amazon S3 Using Sqoop, Configuring ADLS Access Using Cloudera Manager, Importing Data into Microsoft Azure Data Lake Store Using Sqoop, Configuring Google Cloud Storage Connectivity, How To Create a Multitenant Enterprise Data Hub, Configuring Authentication in Cloudera Manager, Configuring External Authentication and Authorization for Cloudera Manager, Step 2: Install JCE Policy Files for AES-256 Encryption, Step 3: Create the Kerberos Principal for Cloudera Manager Server, Step 4: Enabling Kerberos Using the Wizard, Step 6: Get or Create a Kerberos Principal for Each User Account, Step 7: Prepare the Cluster for Each User, Step 8: Verify that Kerberos Security is Working, Step 9: (Optional) Enable Authentication for HTTP Web Consoles for Hadoop Roles, Kerberos Authentication for Non-Default Users, Managing Kerberos Credentials Using Cloudera Manager, Using a Custom Kerberos Keytab Retrieval Script, Using Auth-to-Local Rules to Isolate Cluster Users, Configuring Authentication for Cloudera Navigator, Cloudera Navigator and External Authentication, Configuring Cloudera Navigator for Active Directory, Configuring Groups for Cloudera Navigator, Configuring Authentication for Other Components, Configuring Kerberos for Flume Thrift Source and Sink Using Cloudera Manager, Using Substitution Variables with Flume for Kerberos Artifacts, Configuring Kerberos Authentication for HBase, Configuring the HBase Client TGT Renewal Period, Using Hive to Run Queries on a Secure HBase Server, Enable Hue to Use Kerberos for Authentication, Enabling Kerberos Authentication for Impala, Using Multiple Authentication Methods with Impala, Configuring Impala Delegation for Hue and BI Tools, Configuring a Dedicated MIT KDC for Cross-Realm Trust, Integrating MIT Kerberos and Active Directory, Hadoop Users (user:group) and Kerberos Principals, Mapping Kerberos Principals to Short Names, Configuring TLS Encryption for Cloudera Manager and CDH Using Auto-TLS, Manually Configuring TLS Encryption for Cloudera Manager, Manually Configuring TLS Encryption on the Agent Listening Port, Manually Configuring TLS/SSL Encryption for CDH Services, Configuring TLS/SSL for HDFS, YARN and MapReduce, Configuring Encrypted Communication Between HiveServer2 and Client Drivers, Configuring TLS/SSL for Navigator Audit Server, Configuring TLS/SSL for Navigator Metadata Server, Configuring TLS/SSL for Kafka (Navigator Event Broker), Configuring Encrypted Transport for HBase, Data at Rest Encryption Reference Architecture, Resource Planning for Data at Rest Encryption, Optimizing Performance for HDFS Transparent Encryption, Enabling HDFS Encryption Using the Wizard, Configuring the Key Management Server (KMS), Configuring KMS Access Control Lists (ACLs), Migrating from a Key Trustee KMS to an HSM KMS, Migrating Keys from a Java KeyStore to Cloudera Navigator Key Trustee Server, Migrating a Key Trustee KMS Server Role Instance to a New Host, Configuring CDH Services for HDFS Encryption, Backing Up and Restoring Key Trustee Server and Clients, Initializing Standalone Key Trustee Server, Configuring a Mail Transfer Agent for Key Trustee Server, Verifying Cloudera Navigator Key Trustee Server Operations, Managing Key Trustee Server Organizations, HSM-Specific Setup for Cloudera Navigator Key HSM, Integrating Key HSM with Key Trustee Server, Registering Cloudera Navigator Encrypt with Key Trustee Server, Preparing for Encryption Using Cloudera Navigator Encrypt, Encrypting and Decrypting Data Using Cloudera Navigator Encrypt, Converting from Device Names to UUIDs for Encrypted Devices, Configuring Encrypted On-disk File Channels for Flume, Installation Considerations for Impala Security, Add Root and Intermediate CAs to Truststore for TLS/SSL, Authenticate Kerberos Principals Using Java, Configure Antivirus Software on CDH Hosts, Configure Browser-based Interfaces to Require Authentication (SPNEGO), Configure Browsers for Kerberos Authentication (SPNEGO), Configure Cluster to Use Kerberos Authentication, Convert DER, JKS, PEM Files for TLS/SSL Artifacts, Obtain and Deploy Keys and Certificates for TLS/SSL, Set Up a Gateway Host to Restrict Access to the Cluster, Set Up Access to Cloudera EDH or Altus Director (Microsoft Azure Marketplace), Using Audit Events to Understand Cluster Activity, Configuring Cloudera Navigator to work with Hue HA, Cloudera Navigator support for Virtual Private Clusters, Encryption (TLS/SSL) and Cloudera Navigator, Limiting Sensitive Data in Navigator Logs, Preventing Concurrent Logins from the Same User, Enabling Audit and Log Collection for Services, Monitoring Navigator Audit Service Health, Configuring the Server for Policy Messages, Using Cloudera Navigator with Altus Clusters, Configuring Extraction for Altus Clusters on AWS, Applying Metadata to HDFS and Hive Entities using the API, Using the Purge APIs for Metadata Maintenance Tasks, Troubleshooting Navigator Data Management, Files Installed by the Flume RPM and Debian Packages, Configuring the Storage Policy for the Write-Ahead Log (WAL), Using the HBCK2 Tool to Remediate HBase Clusters, Exposing HBase Metrics to a Ganglia Server, Configuration Change on Hosts Used with HCatalog, Accessing Table Information with the HCatalog Command-line API, Unable to connect to database with provided credential, Unknown Attribute Name exception while enabling SAML, Downloading query results from Hue takes long time, 502 Proxy Error while accessing Hue from the Load Balancer, Hue Load Balancer does not start after enabling TLS, Unable to kill Hive queries from Job Browser, Unable to connect Oracle database to Hue using SCAN, Increasing the maximum number of processes for Oracle database, Unable to authenticate to Hbase when using Hue, ARRAY Complex Type (CDH 5.5 or higher only), MAP Complex Type (CDH 5.5 or higher only), STRUCT Complex Type (CDH 5.5 or higher only), VARIANCE, VARIANCE_SAMP, VARIANCE_POP, VAR_SAMP, VAR_POP, Configuring Resource Pools and Admission Control, Managing Topics across Multiple Kafka Clusters, Setting up an End-to-End Data Streaming Pipeline, Kafka Security Hardening with Zookeeper ACLs, Configuring an External Database for Oozie, Configuring Oozie to Enable MapReduce Jobs To Read/Write from Amazon S3, Configuring Oozie to Enable MapReduce Jobs To Read/Write from Microsoft Azure (ADLS), Starting, Stopping, and Accessing the Oozie Server, Adding the Oozie Service Using Cloudera Manager, Configuring Oozie Data Purge Settings Using Cloudera Manager, Dumping and Loading an Oozie Database Using Cloudera Manager, Adding Schema to Oozie Using Cloudera Manager, Enabling the Oozie Web Console on Managed Clusters, Scheduling in Oozie Using Cron-like Syntax, Installing Apache Phoenix using Cloudera Manager, Using Apache Phoenix to Store and Access Data, Orchestrating SQL and APIs with Apache Phoenix, Creating and Using User-Defined Functions (UDFs) in Phoenix, Mapping Phoenix Schemas to HBase Namespaces, Associating Tables of a Schema to a Namespace, Understanding Apache Phoenix-Spark Connector, Understanding Apache Phoenix-Hive Connector, Using MapReduce Batch Indexing to Index Sample Tweets, Near Real Time (NRT) Indexing Tweets Using Flume, Using Search through a Proxy for High Availability, Enable Kerberos Authentication in Cloudera Search, Flume MorphlineSolrSink Configuration Options, Flume MorphlineInterceptor Configuration Options, Flume Solr UUIDInterceptor Configuration Options, Flume Solr BlobHandler Configuration Options, Flume Solr BlobDeserializer Configuration Options, Solr Query Returns no Documents when Executed with a Non-Privileged User, Installing and Upgrading the Sentry Service, Configuring Sentry Authorization for Cloudera Search, Synchronizing HDFS ACLs and Sentry Permissions, Authorization Privilege Model for Hive and Impala, Authorization Privilege Model for Cloudera Search, Frequently Asked Questions about Apache Spark in CDH, Developing and Running a Spark WordCount Application, Accessing Data Stored in Amazon S3 through Spark, Accessing Data Stored in Azure Data Lake Store (ADLS) through Spark, Accessing Avro Data Files From Spark SQL Applications, Accessing Parquet Files From Spark SQL Applications, Building and Running a Crunch Application with Spark, Best Practices for Using MSCK REPAIR TABLE, Tuning Apache Hive Performance on the Amazon S3 Filesystem in CDH, Tuning Hive MSCK (Metastore Check) Performance on S3, In Cloudera Manager, from the home page, go to.

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msck repair table hive not working

msck repair table hive not working